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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886456.1_cds_XP_016440597.1_36040
CDS Infomation

[gene=LOC107766344] [db_xref=GeneID:107766344] [protein=putative transcription factor bHLH041] [protein_id=XP_016440597.1] [location=join(166470..166582,166707..166805,167021..167126,167217..167231,167343..167405,167524..168255,169294..169692,171352..171417)] [gbkey=CDS]
Sequence

ATGGACTCCATCTTCTTCCTTGAAGAAGGAGACCGCGCCGTCTTTCTCTTAAAGATAATG
GAGTCCTTAGGTTGCAATTACATATGCCTTTGGCAATATTACCAACCTTCTAACTGTTTT
ATGTCCTTGGGTGGAATCTACAATGGAGACAGTGATGTTGCCCAGAGGCTATTCCAAGAG
TATAGGCATTCATGGCTTATCATGGACAATGGCCGCATTCCAGGACTGGCTTTCAAGAAC
AATGTTCCTTATATGGAGCTGCAGTTTGCAGATTTTCAATCACATGCATCCAATCCAGTT
CAACTTCAATTCTACCAGGAAGCTGGAATCAAGACAGTTATCTGTATGGGGTGTAGCATT
GGAGAAATTGAGGTTGGAATGACTTCTAGCCCTCAAGTAAACTTGGAAATGGGACTGAAA
AACTTGTTTGCCGACTATTTCTCAAGACAAGCAGTAGCACCCGCAGCAGCAGTAGCAACA
AGAGGAATTCCTAAGCAGTTACTGCCAATTGATCAAAATCGGCCATCATCATCTTCATCA
TTCTCAATCGATAGCCCAGGCGAATACTCATCCCTTCTCTTCAATGTAGCAAGCAAGTCG
CCATATGTACCAGAACAGCCGCGAACGGATACCTTTTCCGATCAGACAATTAGACCAATT
CCACCGGTATCTGCTACCGCCACGCCATATCAACAAGCCATTCAGACATTAAATCAAATA
CAAGGCATACAATTACCGACACTAGAAACCGAAGACGTTGCATTAACAAGAGCGTATCTC
GCTGTCATGACATCGCCCTCTTCTTCTTCCTCCTCTCGCCAATCCAGAGAAAACTTACCC
ACACAAATAGCAACACAAAAAGCCACTGCATTTACAAGGTTTAGGTCAGGTTTAGGTCCC
AATTTGCCAATAGCAACAGCCACAACTCGCCGACAAAACATGTTTAGAAGATCTATCAAT
TTCTTCAGAAATTTAAATATGATGAGATCAAGGCAAGAACAAATGCAGCCTAACCCGCGT
GCCCCTACAAGTACTCAGGTTCATCACATGATTTCAGAGAGACGAAGACGCGAAAAGCTT
AACGATAGCTTTCAACTACTTAGATCTTTACTCCCACCTGGTACTAAGAAGGACAAAGCA
TCAGTACTTGCCAGTACAACAGAATATTTAAGTTCATTAAAAGGTCAAGTGGAAGAACTG
AGTAAAAAGAATGAAATGTTGGAAGCACAATTACTTCAACCTCAAAACAAATCCTCCTTT
GAACAGGCAATTATTAGCTCCTCCGCTGGTGGAAATGAAAGGATAGCTGTTGAAATAACA
AATGTAGGTGAGTCAACATCAGAATCAAGAACAGTGGACTTGCAAATTTCAGTAACGAGA
GAATGCAGCATCTTGGATTTGGTTACTCGTTTGCTGGAATTCTTGAAAAGAGACAACAAT
GTAAACTTAGAGTCAGTAGCAGCAAACACCAGATCAGTGGTTCAATCAGAACCTGTAACT
CATATAATCTTGAGAGTTAGAATTGAGGGTAGTGAATGGGACGAATCTAGTTTCCAGGAA
GGAGTGAAAAGGGTTGTTGATGACTTGGCATAG

Peptide Sequence

PEP ID

XP_016440597.1
PEP Infomation

PREDICTED: putative transcription factor bHLH041 [Nicotiana tabacum]
Sequence

MDSIFFLEEGDRAVFLLKIMESLGCNYICLWQYYQPSNCFMSLGGIYNGDSDVAQRLFQE
YRHSWLIMDNGRIPGLAFKNNVPYMELQFADFQSHASNPVQLQFYQEAGIKTVICMGCSI
GEIEVGMTSSPQVNLEMGLKNLFADYFSRQAVAPAAAVATRGIPKQLLPIDQNRPSSSSS
FSIDSPGEYSSLLFNVASKSPYVPEQPRTDTFSDQTIRPIPPVSATATPYQQAIQTLNQI
QGIQLPTLETEDVALTRAYLAVMTSPSSSSSSRQSRENLPTQIATQKATAFTRFRSGLGP
NLPIATATTRRQNMFRRSINFFRNLNMMRSRQEQMQPNPRAPTSTQVHHMISERRRREKL
NDSFQLLRSLLPPGTKKDKASVLASTTEYLSSLKGQVEELSKKNEMLEAQLLQPQNKSSF
EQAIISSSAGGNERIAVEITNVGESTSESRTVDLQISVTRECSILDLVTRLLEFLKRDNN
VNLESVAANTRSVVQSEPVTHIILRVRIEGSEWDESSFQEGVKRVVDDLA

Transcript Sequence

Gene sequence data has not been registered.